Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ROS1P08922 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.16■□□□□ 0.02
ROS1P08922 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.16■□□□□ 0.02
ROS1P08922 BX005266.1-201ENST00000473402 457 ntBASIC15.16■□□□□ 0.02
ROS1P08922 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ROS1P08922 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
ROS1P08922 AC006557.2-201ENST00000592985 1240 ntBASIC15.16■□□□□ 0.02
ROS1P08922 AC007613.1-201ENST00000572811 2597 ntBASIC15.16■□□□□ 0.02
ROS1P08922 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ROS1P08922 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ROS1P08922 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ROS1P08922 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ROS1P08922 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.15■□□□□ 0.02
ROS1P08922 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.15■□□□□ 0.02
ROS1P08922 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.15■□□□□ 0.02
ROS1P08922 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.15■□□□□ 0.02
ROS1P08922 AC108751.1-201ENST00000490852 363 ntBASIC15.15■□□□□ 0.02
ROS1P08922 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.15■□□□□ 0.02
ROS1P08922 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ROS1P08922 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
ROS1P08922 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 AL049757.1-201ENST00000616842 1596 ntBASIC15.15■□□□□ 0.02
ROS1P08922 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.15■□□□□ 0.02
ROS1P08922 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.15■□□□□ 0.02
ROS1P08922 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.15■□□□□ 0.02
ROS1P08922 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.15■□□□□ 0.02
ROS1P08922 FAM197Y3-203ENST00000618346 717 ntBASIC15.15■□□□□ 0.02
ROS1P08922 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ROS1P08922 AC134684.3-201ENST00000641758 218 ntBASIC15.15■□□□□ 0.02
ROS1P08922 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.15■□□□□ 0.02
ROS1P08922 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ROS1P08922 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ROS1P08922 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 REXO1L11P-201ENST00000620964 1927 ntBASIC15.14■□□□□ 0.01
ROS1P08922 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 AL022326.1-202ENST00000641533 845 ntBASIC15.14■□□□□ 0.01
ROS1P08922 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 BCL2-203ENST00000589955 5011 ntBASIC15.14■□□□□ 0.01
ROS1P08922 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.14■□□□□ 0.01
ROS1P08922 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.14■□□□□ 0.01
ROS1P08922 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ROS1P08922 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.14■□□□□ 0.01
ROS1P08922 AC009947.1-201ENST00000444350 727 ntBASIC15.14■□□□□ 0.01
ROS1P08922 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.14■□□□□ 0.01
ROS1P08922 HCG4B-203ENST00000450128 991 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms