Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CTSBP07858 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTSBP07858 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSBP07858 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTSBP07858 AC005104.2-201ENST00000427818 678 ntBASIC16.66■□□□□ 0.26
CTSBP07858 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CTSBP07858 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTSBP07858 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSBP07858 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.66■□□□□ 0.26
CTSBP07858 STK19B-204ENST00000512515 211 ntBASIC16.66■□□□□ 0.26
CTSBP07858 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSBP07858 LINC00304-203ENST00000565008 1864 ntBASIC16.66■□□□□ 0.26
CTSBP07858 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSBP07858 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTSBP07858 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.66■□□□□ 0.26
CTSBP07858 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSBP07858 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 AC002558.1-201ENST00000488906 803 ntBASIC16.65■□□□□ 0.26
CTSBP07858 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.65■□□□□ 0.26
CTSBP07858 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.65■□□□□ 0.26
CTSBP07858 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSBP07858 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CTSBP07858 AC134043.2-201ENST00000624206 2238 ntBASIC16.65■□□□□ 0.26
CTSBP07858 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CTSBP07858 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSBP07858 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
CTSBP07858 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSBP07858 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSBP07858 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSBP07858 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CTSBP07858 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 AC003669.1-201ENST00000334569 611 ntBASIC16.64■□□□□ 0.25
CTSBP07858 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSBP07858 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSBP07858 AC098831.1-202ENST00000438821 336 ntBASIC16.64■□□□□ 0.25
CTSBP07858 PRYP5-201ENST00000451909 266 ntBASIC16.64■□□□□ 0.25
CTSBP07858 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.64■□□□□ 0.25
CTSBP07858 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSBP07858 IGHV3-52-201ENST00000519770 353 ntBASIC16.64■□□□□ 0.25
CTSBP07858 IGHV3-22-201ENST00000520721 359 ntBASIC16.64■□□□□ 0.25
CTSBP07858 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSBP07858 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.64■□□□□ 0.25
CTSBP07858 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.64■□□□□ 0.25
CTSBP07858 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 AC008735.5-201ENST00000623544 497 ntBASIC16.64■□□□□ 0.25
CTSBP07858 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.64■□□□□ 0.25
CTSBP07858 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CTSBP07858 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSBP07858 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.64■□□□□ 0.25
CTSBP07858 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTSBP07858 AC009336.1-201ENST00000608941 1553 ntBASIC16.64■□□□□ 0.25
CTSBP07858 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTSBP07858 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.63■□□□□ 0.25
CTSBP07858 AC068880.1-201ENST00000507289 2297 ntBASIC16.63■□□□□ 0.25
CTSBP07858 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CTSBP07858 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTSBP07858 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms