Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 B3GAT3P1-201ENST00000471720 806 ntBASIC14.48□□□□□ -0.09
SCAF4O95104 AC011506.1-201ENST00000474329 610 ntBASIC14.48□□□□□ -0.09
SCAF4O95104 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 DUTP2-201ENST00000519164 463 ntBASIC14.48□□□□□ -0.09
SCAF4O95104 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.48□□□□□ -0.09
SCAF4O95104 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SCAF4O95104 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.48□□□□□ -0.09
SCAF4O95104 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SCAF4O95104 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.47□□□□□ -0.09
SCAF4O95104 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 AC022898.2-201ENST00000616822 1312 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 UNC93B2-201ENST00000285383 730 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.47□□□□□ -0.09
SCAF4O95104 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.47□□□□□ -0.09
SCAF4O95104 FAM207BP-201ENST00000447172 505 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 TSPY15P-201ENST00000457163 923 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 AC008040.2-201ENST00000461049 708 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.47□□□□□ -0.09
SCAF4O95104 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SCAF4O95104 AC008687.5-201ENST00000593746 558 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.47□□□□□ -0.09
SCAF4O95104 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SCAF4O95104 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.47□□□□□ -0.09
SCAF4O95104 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 TSPY26P-202ENST00000565928 3884 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.47□□□□□ -0.09
SCAF4O95104 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
SCAF4O95104 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SCAF4O95104 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SCAF4O95104 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCAF4O95104 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.46□□□□□ -0.09
SCAF4O95104 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms