Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX30O94993 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.43■□□□□ 0.22
SOX30O94993 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX30O94993 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX30O94993 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 AC009053.2-201ENST00000563701 2365 ntBASIC16.42■□□□□ 0.22
SOX30O94993 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX30O94993 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SOX30O94993 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
SOX30O94993 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SOX30O94993 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.42■□□□□ 0.22
SOX30O94993 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SOX30O94993 CHCHD2P8-201ENST00000429873 447 ntBASIC16.42■□□□□ 0.22
SOX30O94993 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 FAM86EP-206ENST00000510506 987 ntBASIC16.42■□□□□ 0.22
SOX30O94993 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.42■□□□□ 0.22
SOX30O94993 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.42■□□□□ 0.22
SOX30O94993 AC009533.2-201ENST00000543664 586 ntBASIC16.42■□□□□ 0.22
SOX30O94993 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SOX30O94993 AL592071.1-201ENST00000611956 408 ntBASIC16.42■□□□□ 0.22
SOX30O94993 AC116407.4-201ENST00000623319 1061 ntBASIC16.42■□□□□ 0.22
SOX30O94993 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 REXO1L11P-201ENST00000620964 1927 ntBASIC16.42■□□□□ 0.22
SOX30O94993 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX30O94993 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.42■□□□□ 0.22
SOX30O94993 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SOX30O94993 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX30O94993 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX30O94993 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SOX30O94993 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
SOX30O94993 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SOX30O94993 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SOX30O94993 UPK3BP1-201ENST00000428678 509 ntBASIC16.41■□□□□ 0.22
SOX30O94993 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.41■□□□□ 0.22
SOX30O94993 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.41■□□□□ 0.22
SOX30O94993 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 AL358472.4-201ENST00000633140 710 ntBASIC16.41■□□□□ 0.22
SOX30O94993 AC125634.1-201ENST00000438758 1403 ntBASIC16.41■□□□□ 0.22
SOX30O94993 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.41■□□□□ 0.22
SOX30O94993 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SOX30O94993 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 AC005332.1-201ENST00000577698 1310 ntBASIC16.41■□□□□ 0.22
SOX30O94993 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX30O94993 SIRPAP1-201ENST00000448467 1770 ntBASIC16.41■□□□□ 0.22
SOX30O94993 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SOX30O94993 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX30O94993 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SOX30O94993 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms