Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.51■□□□□ 0.39
SUPT3HO75486 KRT8P47-201ENST00000604727 1398 ntBASIC17.51■□□□□ 0.39
SUPT3HO75486 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
SUPT3HO75486 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.5■□□□□ 0.39
SUPT3HO75486 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SUPT3HO75486 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.5■□□□□ 0.39
SUPT3HO75486 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.5■□□□□ 0.39
SUPT3HO75486 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.5■□□□□ 0.39
SUPT3HO75486 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.5■□□□□ 0.39
SUPT3HO75486 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 MST1L-201ENST00000442552 2185 ntBASIC17.5■□□□□ 0.39
SUPT3HO75486 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 AL596257.1-201ENST00000641463 2694 ntBASIC17.5■□□□□ 0.39
SUPT3HO75486 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUPT3HO75486 LINC00304-203ENST00000565008 1864 ntBASIC17.5■□□□□ 0.39
SUPT3HO75486 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
SUPT3HO75486 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 AC108860.2-201ENST00000562760 2183 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SUPT3HO75486 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SUPT3HO75486 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
SUPT3HO75486 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 AC005521.1-201ENST00000393351 872 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 TSPY12P-201ENST00000421279 868 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 AC117947.1-201ENST00000427448 529 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 HLA-F-220ENST00000434407 884 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 KRT18P57-201ENST00000443599 1254 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 AC092597.1-201ENST00000487352 616 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.49■□□□□ 0.39
SUPT3HO75486 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.49■□□□□ 0.39
SUPT3HO75486 AC012306.2-201ENST00000609350 630 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SUPT3HO75486 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SUPT3HO75486 AC097493.4-201ENST00000641197 219 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SUPT3HO75486 AL023806.1-201ENST00000603994 1649 ntBASIC17.49■□□□□ 0.39
SUPT3HO75486 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SUPT3HO75486 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SUPT3HO75486 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SUPT3HO75486 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.49■□□□□ 0.39
SUPT3HO75486 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.49■□□□□ 0.39
SUPT3HO75486 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUPT3HO75486 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SUPT3HO75486 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.48■□□□□ 0.39
SUPT3HO75486 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.48■□□□□ 0.39
SUPT3HO75486 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUPT3HO75486 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms