Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.5■□□□□ 0.23
HCN1O60741 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 LINC00265-3P-201ENST00000447588 903 ntBASIC16.5■□□□□ 0.23
HCN1O60741 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.5■□□□□ 0.23
HCN1O60741 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.5■□□□□ 0.23
HCN1O60741 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 AC012615.1-201ENST00000565797 1299 ntBASIC16.5■□□□□ 0.23
HCN1O60741 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.5■□□□□ 0.23
HCN1O60741 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.5■□□□□ 0.23
HCN1O60741 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.5■□□□□ 0.23
HCN1O60741 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HCN1O60741 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 AL353692.3-201ENST00000407031 1396 ntBASIC16.5■□□□□ 0.23
HCN1O60741 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCN1O60741 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HCN1O60741 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HCN1O60741 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HCN1O60741 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HCN1O60741 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.49■□□□□ 0.23
HCN1O60741 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 TOB2P1-201ENST00000469761 992 ntBASIC16.49■□□□□ 0.23
HCN1O60741 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 AC113404.2-201ENST00000507884 177 ntBASIC16.49■□□□□ 0.23
HCN1O60741 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 AC012313.10-201ENST00000623509 926 ntBASIC16.49■□□□□ 0.23
HCN1O60741 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HCN1O60741 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCN1O60741 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.49■□□□□ 0.23
HCN1O60741 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
HCN1O60741 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.48■□□□□ 0.23
HCN1O60741 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCN1O60741 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
HCN1O60741 VENTXP7-201ENST00000475503 772 ntBASIC16.48■□□□□ 0.23
HCN1O60741 AP000867.3-201ENST00000524675 377 ntBASIC16.48■□□□□ 0.23
HCN1O60741 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.48■□□□□ 0.23
HCN1O60741 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.48■□□□□ 0.23
HCN1O60741 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.48■□□□□ 0.23
HCN1O60741 Z69720.1-201ENST00000601483 472 ntBASIC16.48■□□□□ 0.23
HCN1O60741 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms