Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.17■□□□□ 0.5
TSPAN3O60637 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.17■□□□□ 0.5
TSPAN3O60637 BX276092.7-203ENST00000637198 1536 ntBASIC18.17■□□□□ 0.5
TSPAN3O60637 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN3O60637 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TSPAN3O60637 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.17■□□□□ 0.5
TSPAN3O60637 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
TSPAN3O60637 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.16■□□□□ 0.5
TSPAN3O60637 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.16■□□□□ 0.5
TSPAN3O60637 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TSPAN3O60637 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TSPAN3O60637 RPS2P1-201ENST00000434010 821 ntBASIC18.16■□□□□ 0.5
TSPAN3O60637 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TSPAN3O60637 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.16■□□□□ 0.5
TSPAN3O60637 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.16■□□□□ 0.5
TSPAN3O60637 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.16■□□□□ 0.5
TSPAN3O60637 AL049757.1-201ENST00000616842 1596 ntBASIC18.16■□□□□ 0.5
TSPAN3O60637 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN3O60637 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TSPAN3O60637 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.15■□□□□ 0.5
TSPAN3O60637 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.15■□□□□ 0.5
TSPAN3O60637 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.15■□□□□ 0.5
TSPAN3O60637 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 AC018712.1-201ENST00000455767 687 ntBASIC18.15■□□□□ 0.5
TSPAN3O60637 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 MTDHP4-201ENST00000600287 670 ntBASIC18.15■□□□□ 0.5
TSPAN3O60637 AC019129.2-201ENST00000609837 1235 ntBASIC18.15■□□□□ 0.5
TSPAN3O60637 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.15■□□□□ 0.5
TSPAN3O60637 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TSPAN3O60637 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSPAN3O60637 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.15■□□□□ 0.5
TSPAN3O60637 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TSPAN3O60637 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
TSPAN3O60637 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TSPAN3O60637 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TSPAN3O60637 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TSPAN3O60637 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.14■□□□□ 0.49
TSPAN3O60637 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TSPAN3O60637 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.14■□□□□ 0.49
TSPAN3O60637 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TSPAN3O60637 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.14■□□□□ 0.49
TSPAN3O60637 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.14■□□□□ 0.49
TSPAN3O60637 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
TSPAN3O60637 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.14■□□□□ 0.49
TSPAN3O60637 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.14■□□□□ 0.49
TSPAN3O60637 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TSPAN3O60637 AL022342.1-201ENST00000400363 863 ntBASIC18.14■□□□□ 0.49
TSPAN3O60637 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSPAN3O60637 AL590627.1-203ENST00000421194 1026 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms