Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.27■□□□□ 0.36
VEGFDO43915 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.27■□□□□ 0.36
VEGFDO43915 TP73-AS1-207ENST00000624167 988 ntBASIC17.27■□□□□ 0.36
VEGFDO43915 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFDO43915 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFDO43915 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.27■□□□□ 0.35
VEGFDO43915 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VEGFDO43915 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.27■□□□□ 0.35
VEGFDO43915 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
VEGFDO43915 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.26■□□□□ 0.35
VEGFDO43915 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.26■□□□□ 0.35
VEGFDO43915 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VEGFDO43915 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AC026396.1-201ENST00000419388 421 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 KRT18P67-201ENST00000432816 1264 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.26■□□□□ 0.35
VEGFDO43915 AF186996.4-201ENST00000467186 377 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.26■□□□□ 0.35
VEGFDO43915 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AL662844.1-201ENST00000546340 181 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.26■□□□□ 0.35
VEGFDO43915 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AL139327.4-201ENST00000612362 153 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AL022326.1-202ENST00000641533 845 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
VEGFDO43915 AC009336.1-201ENST00000608941 1553 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AL355312.1-201ENST00000407115 2176 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 AC007613.1-201ENST00000572811 2597 ntBASIC17.26■□□□□ 0.35
VEGFDO43915 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VEGFDO43915 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFDO43915 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VEGFDO43915 AC134043.2-201ENST00000624206 2238 ntBASIC17.25■□□□□ 0.35
VEGFDO43915 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.25■□□□□ 0.35
VEGFDO43915 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.25■□□□□ 0.35
VEGFDO43915 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VEGFDO43915 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.25■□□□□ 0.35
VEGFDO43915 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.25■□□□□ 0.35
VEGFDO43915 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.25■□□□□ 0.35
VEGFDO43915 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.25■□□□□ 0.35
VEGFDO43915 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.25■□□□□ 0.35
VEGFDO43915 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.25■□□□□ 0.35
VEGFDO43915 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.25■□□□□ 0.35
VEGFDO43915 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VEGFDO43915 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
VEGFDO43915 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VEGFDO43915 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms