Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSNA1O43805 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.04■□□□□ -0
SSNA1O43805 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.04■□□□□ -0
SSNA1O43805 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSNA1O43805 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.04■□□□□ -0
SSNA1O43805 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSNA1O43805 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SSNA1O43805 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SSNA1O43805 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SSNA1O43805 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SSNA1O43805 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SSNA1O43805 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.04■□□□□ -0
SSNA1O43805 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSNA1O43805 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.03■□□□□ -0
SSNA1O43805 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.03■□□□□ -0
SSNA1O43805 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.03■□□□□ -0
SSNA1O43805 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSNA1O43805 KRT8P11-201ENST00000409686 1436 ntBASIC15.03■□□□□ -0
SSNA1O43805 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 AC008406.3-201ENST00000620001 1374 ntBASIC15.03■□□□□ -0
SSNA1O43805 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSNA1O43805 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.03■□□□□ -0
SSNA1O43805 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.03■□□□□ -0
SSNA1O43805 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.03■□□□□ -0
SSNA1O43805 AC092068.3-201ENST00000587894 2016 ntBASIC15.03■□□□□ -0
SSNA1O43805 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.03■□□□□ -0
SSNA1O43805 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SSNA1O43805 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.03■□□□□ -0
SSNA1O43805 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.03■□□□□ -0
SSNA1O43805 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSNA1O43805 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.02■□□□□ -0
SSNA1O43805 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
SSNA1O43805 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.02■□□□□ -0
SSNA1O43805 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.02■□□□□ -0
SSNA1O43805 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SSNA1O43805 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SSNA1O43805 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSNA1O43805 AC093787.1-201ENST00000450396 207 ntBASIC15.02■□□□□ -0
SSNA1O43805 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.02■□□□□ -0
SSNA1O43805 DUX4L16-201ENST00000555130 1264 ntBASIC15.02■□□□□ -0
SSNA1O43805 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SSNA1O43805 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.02□□□□□ -0.01
SSNA1O43805 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.02□□□□□ -0.01
SSNA1O43805 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SSNA1O43805 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SSNA1O43805 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 SBF1P1-201ENST00000444527 5631 ntBASIC15.02□□□□□ -0.01
SSNA1O43805 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SSNA1O43805 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSNA1O43805 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSNA1O43805 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.01□□□□□ -0.01
SSNA1O43805 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms