Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.9■□□□□ 0.46
RIPK2O43353 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RIPK2O43353 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 SLC25A1P3-201ENST00000395415 828 ntBASIC17.9■□□□□ 0.46
RIPK2O43353 AL390955.1-201ENST00000428694 934 ntBASIC17.9■□□□□ 0.46
RIPK2O43353 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.9■□□□□ 0.46
RIPK2O43353 FITM1-202ENST00000559294 800 ntBASIC17.9■□□□□ 0.46
RIPK2O43353 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RIPK2O43353 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.9■□□□□ 0.46
RIPK2O43353 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.9■□□□□ 0.46
RIPK2O43353 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIPK2O43353 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.9■□□□□ 0.46
RIPK2O43353 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.89■□□□□ 0.46
RIPK2O43353 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RIPK2O43353 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.89■□□□□ 0.46
RIPK2O43353 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RIPK2O43353 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.89■□□□□ 0.46
RIPK2O43353 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RIPK2O43353 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
RIPK2O43353 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 RNF216P1-203ENST00000404404 2427 ntBASIC17.89■□□□□ 0.45
RIPK2O43353 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RIPK2O43353 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RIPK2O43353 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.89■□□□□ 0.45
RIPK2O43353 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.89■□□□□ 0.45
RIPK2O43353 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.89■□□□□ 0.45
RIPK2O43353 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.89■□□□□ 0.45
RIPK2O43353 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.89■□□□□ 0.45
RIPK2O43353 AP000525.1-201ENST00000608286 694 ntBASIC17.89■□□□□ 0.45
RIPK2O43353 ITM2C-210ENST00000620962 501 ntBASIC17.89■□□□□ 0.45
RIPK2O43353 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 AL157888.1-201ENST00000631930 593 ntBASIC17.89■□□□□ 0.45
RIPK2O43353 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
RIPK2O43353 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 AC092053.1-201ENST00000605787 1936 ntBASIC17.89■□□□□ 0.45
RIPK2O43353 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.89■□□□□ 0.45
RIPK2O43353 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIPK2O43353 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.89■□□□□ 0.45
RIPK2O43353 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
RIPK2O43353 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.88■□□□□ 0.45
RIPK2O43353 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.88■□□□□ 0.45
RIPK2O43353 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.88■□□□□ 0.45
RIPK2O43353 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.88■□□□□ 0.45
RIPK2O43353 AL139327.4-201ENST00000612362 153 ntBASIC17.88■□□□□ 0.45
RIPK2O43353 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.88■□□□□ 0.45
RIPK2O43353 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
RIPK2O43353 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms