Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFA1O15239 AL049637.2-201ENST00000641778 930 ntBASIC12.08□□□□□ -0.48
NDUFA1O15239 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFA1O15239 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
NDUFA1O15239 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFA1O15239 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 AC011270.2-201ENST00000624293 2550 ntBASIC12.08□□□□□ -0.48
NDUFA1O15239 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
NDUFA1O15239 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NDUFA1O15239 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 SLC25A1P2-201ENST00000430693 912 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 CCR12P-201ENST00000446203 998 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 TSPY17P-201ENST00000450329 467 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.07□□□□□ -0.48
NDUFA1O15239 HOXB1-202ENST00000577092 1414 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 AP005242.2-201ENST00000580065 1175 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 AC233702.5-201ENST00000584107 538 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 AC026471.5-201ENST00000615068 467 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 REXO1L10P-201ENST00000615707 1290 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 REXO1L12P-201ENST00000622156 912 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 AC113410.3-201ENST00000623366 203 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 LINC01451-201ENST00000623792 534 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.07□□□□□ -0.48
NDUFA1O15239 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 CICP6-201ENST00000457191 2729 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 AL391005.1-201ENST00000623953 2435 ntBASIC12.07□□□□□ -0.48
NDUFA1O15239 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NDUFA1O15239 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NDUFA1O15239 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
NDUFA1O15239 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
NDUFA1O15239 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms