Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ATP2A1O14983 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ATP2A1O14983 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 MYCLP1-201ENST00000372451 1075 ntBASIC20.11■□□□□ 0.81
ATP2A1O14983 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 PRSS29P-201ENST00000440800 595 ntBASIC20.11■□□□□ 0.81
ATP2A1O14983 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 RPS15P9-201ENST00000494093 319 ntBASIC20.11■□□□□ 0.81
ATP2A1O14983 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.11■□□□□ 0.81
ATP2A1O14983 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.11■□□□□ 0.81
ATP2A1O14983 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.11■□□□□ 0.81
ATP2A1O14983 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.11■□□□□ 0.81
ATP2A1O14983 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 FLJ13224-201ENST00000313737 1514 ntBASIC20.11■□□□□ 0.81
ATP2A1O14983 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATP2A1O14983 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ATP2A1O14983 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.1■□□□□ 0.81
ATP2A1O14983 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.1■□□□□ 0.81
ATP2A1O14983 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.1■□□□□ 0.81
ATP2A1O14983 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ATP2A1O14983 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.1■□□□□ 0.81
ATP2A1O14983 KRT18P2-201ENST00000447938 1258 ntBASIC20.1■□□□□ 0.81
ATP2A1O14983 AC112482.1-201ENST00000492080 688 ntBASIC20.1■□□□□ 0.81
ATP2A1O14983 AL805961.1-202ENST00000641562 540 ntBASIC20.1■□□□□ 0.81
ATP2A1O14983 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.1■□□□□ 0.81
ATP2A1O14983 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.1■□□□□ 0.81
ATP2A1O14983 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
ATP2A1O14983 GPR89P-201ENST00000407924 1495 ntBASIC20.1■□□□□ 0.81
ATP2A1O14983 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ATP2A1O14983 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP2A1O14983 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.1■□□□□ 0.81
ATP2A1O14983 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.09■□□□□ 0.81
ATP2A1O14983 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
ATP2A1O14983 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATP2A1O14983 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ATP2A1O14983 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.09■□□□□ 0.81
ATP2A1O14983 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.09■□□□□ 0.81
ATP2A1O14983 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.09■□□□□ 0.81
ATP2A1O14983 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.09■□□□□ 0.81
ATP2A1O14983 AC108073.2-201ENST00000464002 357 ntBASIC20.09■□□□□ 0.81
ATP2A1O14983 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP2A1O14983 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.09■□□□□ 0.81
ATP2A1O14983 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP2A1O14983 AC010327.4-202ENST00000591484 748 ntBASIC20.09■□□□□ 0.81
ATP2A1O14983 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ATP2A1O14983 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP2A1O14983 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP2A1O14983 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP2A1O14983 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP2A1O14983 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
ATP2A1O14983 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP2A1O14983 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.08■□□□□ 0.81
ATP2A1O14983 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP2A1O14983 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP2A1O14983 AC090164.3-201ENST00000610780 2143 ntBASIC20.08■□□□□ 0.81
ATP2A1O14983 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP2A1O14983 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATP2A1O14983 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP2A1O14983 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP2A1O14983 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.08■□□□□ 0.81
ATP2A1O14983 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP2A1O14983 MTDHP5-201ENST00000598980 586 ntBASIC20.08■□□□□ 0.81
ATP2A1O14983 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.08■□□□□ 0.81
ATP2A1O14983 AL353135.1-201ENST00000606729 504 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms