Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 SPCS2P4-201ENST00000436160 681 ntBASIC24.22■■□□□ 1.47
CHD2O14647 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
CHD2O14647 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD2O14647 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD2O14647 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
CHD2O14647 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD2O14647 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD2O14647 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CHD2O14647 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CHD2O14647 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.22■■□□□ 1.47
CHD2O14647 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 COQ6-210ENST00000554920 649 ntTSL 3 BASIC24.21■■□□□ 1.47
CHD2O14647 CD7-202ENST00000578509 925 ntTSL 3 BASIC24.21■■□□□ 1.47
CHD2O14647 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
CHD2O14647 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC24.21■■□□□ 1.47
CHD2O14647 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
CHD2O14647 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC24.21■■□□□ 1.47
CHD2O14647 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD2O14647 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC24.21■■□□□ 1.47
CHD2O14647 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.21■■□□□ 1.47
CHD2O14647 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC24.21■■□□□ 1.47
CHD2O14647 AL135999.2-201ENST00000622438 1686 ntBASIC24.21■■□□□ 1.47
CHD2O14647 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC24.21■■□□□ 1.47
CHD2O14647 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
CHD2O14647 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.2■■□□□ 1.46
CHD2O14647 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC24.2■■□□□ 1.46
CHD2O14647 TSSK5P-201ENST00000423978 907 ntBASIC24.2■■□□□ 1.46
CHD2O14647 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC24.2■■□□□ 1.46
CHD2O14647 IGHV3-42-201ENST00000520410 361 ntBASIC24.2■■□□□ 1.46
CHD2O14647 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC24.2■■□□□ 1.46
CHD2O14647 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC24.2■■□□□ 1.46
CHD2O14647 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD2O14647 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD2O14647 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD2O14647 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.2■■□□□ 1.46
CHD2O14647 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD2O14647 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CHD2O14647 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CHD2O14647 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CHD2O14647 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.19■■□□□ 1.46
CHD2O14647 LINC01225-203ENST00000563550 1244 ntBASIC24.19■■□□□ 1.46
CHD2O14647 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD2O14647 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.19■■□□□ 1.46
CHD2O14647 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CHD2O14647 SERF2-217ENST00000630046 862 ntTSL 5 BASIC24.19■■□□□ 1.46
CHD2O14647 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CHD2O14647 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD2O14647 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.19■■□□□ 1.46
CHD2O14647 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD2O14647 CALY-202ENST00000368555 783 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD2O14647 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD2O14647 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC24.19■■□□□ 1.46
CHD2O14647 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC24.19■■□□□ 1.46
CHD2O14647 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD2O14647 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD2O14647 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD2O14647 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CHD2O14647 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC24.18■■□□□ 1.46
CHD2O14647 POR-209ENST00000439269 1858 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD2O14647 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CHD2O14647 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD2O14647 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHD2O14647 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD2O14647 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC24.18■■□□□ 1.46
CHD2O14647 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC24.18■■□□□ 1.46
CHD2O14647 CR383656.12-201ENST00000549567 513 ntBASIC24.18■■□□□ 1.46
CHD2O14647 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD2O14647 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC24.18■■□□□ 1.46
CHD2O14647 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD2O14647 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
CHD2O14647 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD2O14647 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD2O14647 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CHD2O14647 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 AL596325.1-201ENST00000563991 1082 ntBASIC24.17■■□□□ 1.46
CHD2O14647 AL161645.1-201ENST00000622716 1255 ntBASIC24.17■■□□□ 1.46
CHD2O14647 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.17■■□□□ 1.46
CHD2O14647 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHD2O14647 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms