Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
AP3D1O14617 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
AP3D1O14617 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.52■□□□□ 0.24
AP3D1O14617 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
AP3D1O14617 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
AP3D1O14617 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.52■□□□□ 0.24
AP3D1O14617 AC100803.2-201ENST00000562459 1963 ntBASIC16.52■□□□□ 0.24
AP3D1O14617 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
AP3D1O14617 AK4P3-201ENST00000418260 669 ntBASIC16.52■□□□□ 0.24
AP3D1O14617 TSPY5P-201ENST00000426936 936 ntBASIC16.52■□□□□ 0.24
AP3D1O14617 AL359075.1-203ENST00000462729 1002 ntBASIC16.52■□□□□ 0.24
AP3D1O14617 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.52■□□□□ 0.24
AP3D1O14617 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
AP3D1O14617 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.52■□□□□ 0.24
AP3D1O14617 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP3D1O14617 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
AP3D1O14617 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
AP3D1O14617 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP3D1O14617 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.52■□□□□ 0.23
AP3D1O14617 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3D1O14617 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
AP3D1O14617 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP3D1O14617 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
AP3D1O14617 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3D1O14617 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP3D1O14617 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.51■□□□□ 0.23
AP3D1O14617 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3D1O14617 RNF152P1-201ENST00000397754 604 ntBASIC16.51■□□□□ 0.23
AP3D1O14617 RCN1P1-201ENST00000400413 996 ntBASIC16.51■□□□□ 0.23
AP3D1O14617 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.51■□□□□ 0.23
AP3D1O14617 AC104076.2-201ENST00000448912 469 ntBASIC16.51■□□□□ 0.23
AP3D1O14617 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.51■□□□□ 0.23
AP3D1O14617 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.51■□□□□ 0.23
AP3D1O14617 RN7SL850P-201ENST00000579959 291 ntBASIC16.51■□□□□ 0.23
AP3D1O14617 AC024563.2-201ENST00000603282 481 ntBASIC16.51■□□□□ 0.23
AP3D1O14617 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3D1O14617 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 AL355312.1-201ENST00000407115 2176 ntBASIC16.51■□□□□ 0.23
AP3D1O14617 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP3D1O14617 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3D1O14617 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
AP3D1O14617 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3D1O14617 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP3D1O14617 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms