Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 SPDYE13P-201ENST00000445314 798 ntBASIC12.92□□□□□ -0.34
NACAE9PAV3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.92□□□□□ -0.34
NACAE9PAV3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.92□□□□□ -0.34
NACAE9PAV3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.92□□□□□ -0.34
NACAE9PAV3 AC093458.2-201ENST00000623150 629 ntBASIC12.92□□□□□ -0.34
NACAE9PAV3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.92□□□□□ -0.34
NACAE9PAV3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NACAE9PAV3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
NACAE9PAV3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.92□□□□□ -0.34
NACAE9PAV3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 AC113404.2-201ENST00000507884 177 ntBASIC12.92□□□□□ -0.34
NACAE9PAV3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.92□□□□□ -0.34
NACAE9PAV3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
NACAE9PAV3 AC112497.1-201ENST00000624824 639 ntBASIC12.92□□□□□ -0.34
NACAE9PAV3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NACAE9PAV3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NACAE9PAV3 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.91□□□□□ -0.34
NACAE9PAV3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 GNAS-203ENST00000306120 1878 ntBASIC12.91□□□□□ -0.34
NACAE9PAV3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.91□□□□□ -0.34
NACAE9PAV3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.91□□□□□ -0.34
NACAE9PAV3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.91□□□□□ -0.34
NACAE9PAV3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.91□□□□□ -0.34
NACAE9PAV3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.91□□□□□ -0.34
NACAE9PAV3 MIR3917-201ENST00000580971 93 ntBASIC12.91□□□□□ -0.34
NACAE9PAV3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
NACAE9PAV3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NACAE9PAV3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NACAE9PAV3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.91□□□□□ -0.34
NACAE9PAV3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.91□□□□□ -0.34
NACAE9PAV3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NACAE9PAV3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NACAE9PAV3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NACAE9PAV3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NACAE9PAV3 HOMER2P1-201ENST00000455653 964 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms