Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 AL596275.1-201ENST00000423464 877 ntBASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 AL390719.2-201ENST00000606993 987 ntBASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV5-3A0A0A0MS03 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 HBZP1-201ENST00000354915 429 ntBASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 YBX1P2-201ENST00000489612 999 ntBASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV5-3A0A0A0MS03 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZNF444P1-201ENST00000559497 298 ntBASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV5-3A0A0A0MS03 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms