Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 AC087499.1-201ENST00000418141 1075 ntBASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 DGCR10-201ENST00000609839 495 ntBASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB1Q9Y5G3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AP001412.1-201ENST00000608405 714 ntBASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AL049637.2-201ENST00000641778 930 ntBASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB1Q9Y5G3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 AC100803.2-201ENST00000562459 1963 ntBASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB1Q9Y5G3 MIR4785-201ENST00000585005 73 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms