Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 BICD1-207ENST00000551848 1962 ntBASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB8Q9UN66 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 AP002414.3-201ENST00000589352 1468 ntBASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 AC006557.2-201ENST00000592985 1240 ntBASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 AC148477.5-201ENST00000625164 1645 ntBASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB8Q9UN66 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AC040160.2-201ENST00000623816 1675 ntBASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 ZNF259P1-201ENST00000407656 1365 ntBASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 SIGLEC30P-201ENST00000455569 941 ntBASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 KRT18P58-201ENST00000527480 1120 ntBASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AL589182.2-201ENST00000619332 1049 ntBASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB8Q9UN66 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 KRT18P27-201ENST00000427733 1299 ntBASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 AC009948.4-201ENST00000604692 675 ntBASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB8Q9UN66 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms