Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 DUX4L27-201ENST00000554796 1261 ntBASIC17.45■□□□□ 0.38
NCDNQ9UBB6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 AC023141.13-201ENST00000604991 943 ntBASIC17.45■□□□□ 0.38
NCDNQ9UBB6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.45■□□□□ 0.38
NCDNQ9UBB6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 HLA-V-201ENST00000429037 534 ntBASIC17.44■□□□□ 0.38
NCDNQ9UBB6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 AC002472.2-201ENST00000442739 958 ntBASIC17.44■□□□□ 0.38
NCDNQ9UBB6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 AC022145.2-201ENST00000598203 171 ntBASIC17.44■□□□□ 0.38
NCDNQ9UBB6 AL390955.2-201ENST00000603032 514 ntBASIC17.44■□□□□ 0.38
NCDNQ9UBB6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 AC092902.6-201ENST00000641783 218 ntBASIC17.44■□□□□ 0.38
NCDNQ9UBB6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.44■□□□□ 0.38
NCDNQ9UBB6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 AC103564.2-201ENST00000432853 1299 ntBASIC17.43■□□□□ 0.38
NCDNQ9UBB6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.43■□□□□ 0.38
NCDNQ9UBB6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCDNQ9UBB6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 MYLKP1-201ENST00000509077 1580 ntBASIC17.42■□□□□ 0.38
NCDNQ9UBB6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 TSPY16P-201ENST00000449843 468 ntBASIC17.42■□□□□ 0.38
NCDNQ9UBB6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.42■□□□□ 0.38
NCDNQ9UBB6 AL353135.1-201ENST00000606729 504 ntBASIC17.42■□□□□ 0.38
NCDNQ9UBB6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
NCDNQ9UBB6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms