Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 DDX43P3-201ENST00000441064 443 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 SIGLEC30P-201ENST00000455569 941 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 RNA5SP416-201ENST00000516838 111 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 AC019129.2-201ENST00000609837 1235 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 AC148477.5-201ENST00000625164 1645 ntBASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.02■□□□□ 0.31
LRIT1Q9P2V4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 AC007967.2-201ENST00000432613 625 ntBASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 IGHV3-52-201ENST00000519770 353 ntBASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 AC004706.3-202ENST00000621574 984 ntBASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRIT1Q9P2V4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17■□□□□ 0.31
LRIT1Q9P2V4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRIT1Q9P2V4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 NCF1C-201ENST00000438382 1427 ntBASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 AC108751.1-201ENST00000490852 363 ntBASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 STK19B-204ENST00000512515 211 ntBASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.99■□□□□ 0.31
LRIT1Q9P2V4 AC040169.1-201ENST00000565382 521 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms