Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 TNXA-203ENST00000507684 2038 ntBASIC18.22■□□□□ 0.51
HCFC1R1Q9NWW0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 AP002414.1-201ENST00000391405 1147 ntBASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 CEND1P1-201ENST00000451006 455 ntBASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 AC002558.1-201ENST00000488906 803 ntBASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HCFC1R1Q9NWW0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
HCFC1R1Q9NWW0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.21■□□□□ 0.5
HCFC1R1Q9NWW0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 ELL2P1-201ENST00000413990 1906 ntBASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 AC254562.1-201ENST00000417586 456 ntBASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 KRT19P2-202ENST00000557173 1012 ntBASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 PDPK2P-202ENST00000562415 1191 ntBASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 AC087289.5-201ENST00000586076 3175 ntBASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCFC1R1Q9NWW0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 CNN2P11-201ENST00000429351 262 ntBASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 AC096734.2-201ENST00000562054 433 ntBASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 AL031432.2-201ENST00000566714 459 ntBASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 AL928711.1-201ENST00000570165 459 ntBASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 AC104581.1-202ENST00000635932 2618 ntBASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.19■□□□□ 0.5
HCFC1R1Q9NWW0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1R1Q9NWW0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1R1Q9NWW0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1R1Q9NWW0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC1R1Q9NWW0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HCFC1R1Q9NWW0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms