Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 AC104076.2-201ENST00000448912 469 ntBASIC16.46■□□□□ 0.23
RLIMQ9NVW2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 KRT8P47-201ENST00000604727 1398 ntBASIC16.46■□□□□ 0.23
RLIMQ9NVW2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RLIMQ9NVW2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RLIMQ9NVW2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 HBZP1-201ENST00000354915 429 ntBASIC16.45■□□□□ 0.22
RLIMQ9NVW2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 AC112907.2-201ENST00000448639 330 ntBASIC16.45■□□□□ 0.22
RLIMQ9NVW2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ZNF444P1-201ENST00000559497 298 ntBASIC16.45■□□□□ 0.22
RLIMQ9NVW2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.45■□□□□ 0.22
RLIMQ9NVW2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
RLIMQ9NVW2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
RLIMQ9NVW2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 HOMER2P1-201ENST00000455653 964 ntBASIC16.44■□□□□ 0.22
RLIMQ9NVW2 AP003733.1-201ENST00000491725 852 ntBASIC16.44■□□□□ 0.22
RLIMQ9NVW2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 HYMAI.1-201ENST00000620949 238 ntBASIC16.44■□□□□ 0.22
RLIMQ9NVW2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.44■□□□□ 0.22
RLIMQ9NVW2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RLIMQ9NVW2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RLIMQ9NVW2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RLIMQ9NVW2 REXO1L11P-201ENST00000620964 1927 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms