Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSU72Q9NP77 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSU72Q9NP77 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AL162727.3-201ENST00000635661 2787 ntBASIC17.49■□□□□ 0.39
SSU72Q9NP77 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.49■□□□□ 0.39
SSU72Q9NP77 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 AC092053.1-201ENST00000605787 1936 ntBASIC17.49■□□□□ 0.39
SSU72Q9NP77 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSU72Q9NP77 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSU72Q9NP77 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 KRT8P9-201ENST00000558927 1449 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 CYP2T1P-202ENST00000641596 2535 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 TSPY14P-201ENST00000303979 915 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 AC112698.1-201ENST00000510299 916 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 AP003071.4-201ENST00000562276 1284 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 C2orf69P3-201ENST00000565542 1120 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 AC024563.2-201ENST00000603282 481 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSU72Q9NP77 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
SSU72Q9NP77 AC006449.5-201ENST00000610658 2098 ntBASIC17.48■□□□□ 0.39
SSU72Q9NP77 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms