Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDH9Q9HC56 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH9Q9HC56 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH9Q9HC56 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH9Q9HC56 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH9Q9HC56 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH9Q9HC56 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 AC116407.4-201ENST00000623319 1061 ntBASIC18.23■□□□□ 0.51
PCDH9Q9HC56 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH9Q9HC56 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 TSPY22P-201ENST00000427496 604 ntBASIC18.22■□□□□ 0.51
PCDH9Q9HC56 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH9Q9HC56 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 IER3-202ENST00000376377 1350 ntBASIC18.21■□□□□ 0.51
PCDH9Q9HC56 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 TSPY12P-201ENST00000421279 868 ntBASIC18.21■□□□□ 0.51
PCDH9Q9HC56 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 AC112698.1-201ENST00000510299 916 ntBASIC18.21■□□□□ 0.51
PCDH9Q9HC56 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 AL358472.4-201ENST00000633140 710 ntBASIC18.21■□□□□ 0.51
PCDH9Q9HC56 AP000550.4-202ENST00000639755 178 ntBASIC18.21■□□□□ 0.51
PCDH9Q9HC56 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 BX276092.7-203ENST00000637198 1536 ntBASIC18.21■□□□□ 0.51
PCDH9Q9HC56 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH9Q9HC56 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
PCDH9Q9HC56 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PCDH9Q9HC56 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDH9Q9HC56 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms