Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 AC008406.3-201ENST00000620001 1374 ntBASIC16.82■□□□□ 0.28
VCX3BQ9H321 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 MIR149-201ENST00000384879 89 ntBASIC16.82■□□□□ 0.28
VCX3BQ9H321 DUTP2-201ENST00000519164 463 ntBASIC16.82■□□□□ 0.28
VCX3BQ9H321 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 AC092068.3-201ENST00000587894 2016 ntBASIC16.81■□□□□ 0.28
VCX3BQ9H321 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 C1QL1P1-201ENST00000568105 661 ntBASIC16.81■□□□□ 0.28
VCX3BQ9H321 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 GPAT2P1-201ENST00000444924 1672 ntBASIC16.81■□□□□ 0.28
VCX3BQ9H321 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCX3BQ9H321 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
VCX3BQ9H321 AC034236.2-201ENST00000606662 1610 ntBASIC16.81■□□□□ 0.28
VCX3BQ9H321 AC105917.1-201ENST00000506637 2539 ntBASIC16.8■□□□□ 0.28
VCX3BQ9H321 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 AC093787.1-201ENST00000450396 207 ntBASIC16.8■□□□□ 0.28
VCX3BQ9H321 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VCX3BQ9H321 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCX3BQ9H321 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms