Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 AC104417.2-201ENST00000562989 1793 ntBASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.18□□□□□ -0.78
CYSTM1Q9H1C7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 AC097637.2-201ENST00000624096 1997 ntBASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
CYSTM1Q9H1C7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CYSTM1Q9H1C7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms