Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 LINC01126-201ENST00000623515 1646 ntBASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AC005837.3-201ENST00000612163 286 ntBASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MDK-213ENST00000617138 635 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AC011767.1-201ENST00000617410 1153 ntBASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 HLA-A-209ENST00000638375 975 ntBASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PCDHA1-201ENST00000378133 2726 ntBASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LCE3DQ9BYE3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms