Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC008040.2-201ENST00000461049 708 ntBASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC110285.5-201ENST00000611501 352 ntBASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC008622.2-201ENST00000617006 1229 ntBASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC093010.1-201ENST00000473625 1624 ntBASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AL023284.2-201ENST00000405850 579 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 FAM207BP-201ENST00000447172 505 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 RPS2P4-201ENST00000476944 856 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AC026366.1-201ENST00000488803 879 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AP002982.1-201ENST00000492365 877 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AC124016.1-201ENST00000609552 612 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AL031985.4-201ENST00000642138 673 ntBASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP4Q9BWG4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms