Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 OR6D1P-203ENST00000641209 4860 ntBASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 AC024563.2-201ENST00000603282 481 ntBASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HDHD3Q9BSH5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 AC060834.1-201ENST00000443027 2032 ntBASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HDHD3Q9BSH5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 LYSMD4-203ENST00000378904 2122 ntBASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms