Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
ABCA3Q99758 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ABCA3Q99758 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC23.22■■□□□ 1.31
ABCA3Q99758 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC23.22■■□□□ 1.31
ABCA3Q99758 AC004890.2-204ENST00000481968 304 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 IGHV3-42-201ENST00000520410 361 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 AC026150.2-201ENST00000564693 1156 ntBASIC23.22■■□□□ 1.31
ABCA3Q99758 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ABCA3Q99758 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.21■■□□□ 1.31
ABCA3Q99758 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
ABCA3Q99758 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ABCA3Q99758 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC23.21■■□□□ 1.31
ABCA3Q99758 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 CALY-202ENST00000368555 783 ntTSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 GATD1-206ENST00000526325 756 ntTSL 5 BASIC23.21■■□□□ 1.31
ABCA3Q99758 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.21■■□□□ 1.31
ABCA3Q99758 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC23.21■■□□□ 1.31
ABCA3Q99758 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC23.21■■□□□ 1.31
ABCA3Q99758 AL645728.2-201ENST00000641974 660 ntBASIC23.21■■□□□ 1.31
ABCA3Q99758 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ABCA3Q99758 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.21■■□□□ 1.31
ABCA3Q99758 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
ABCA3Q99758 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.2■■□□□ 1.31
ABCA3Q99758 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC23.2■■□□□ 1.3
ABCA3Q99758 AL009183.1-201ENST00000603760 355 ntBASIC23.2■■□□□ 1.3
ABCA3Q99758 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.2■■□□□ 1.3
ABCA3Q99758 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.2■■□□□ 1.3
ABCA3Q99758 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ABCA3Q99758 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC23.2■■□□□ 1.3
ABCA3Q99758 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC23.19■■□□□ 1.3
ABCA3Q99758 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.19■■□□□ 1.3
ABCA3Q99758 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ABCA3Q99758 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ABCA3Q99758 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 TMPRSS11CP-201ENST00000453277 683 ntBASIC23.19■■□□□ 1.3
ABCA3Q99758 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC23.19■■□□□ 1.3
ABCA3Q99758 AC010336.2-201ENST00000564226 506 ntBASIC23.19■■□□□ 1.3
ABCA3Q99758 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.19■■□□□ 1.3
ABCA3Q99758 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ABCA3Q99758 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 AL135999.2-201ENST00000622438 1686 ntBASIC23.19■■□□□ 1.3
ABCA3Q99758 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ABCA3Q99758 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.19■■□□□ 1.3
ABCA3Q99758 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.18■■□□□ 1.3
ABCA3Q99758 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.18■■□□□ 1.3
ABCA3Q99758 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ABCA3Q99758 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC23.18■■□□□ 1.3
ABCA3Q99758 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC23.18■■□□□ 1.3
ABCA3Q99758 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC23.18■■□□□ 1.3
ABCA3Q99758 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
ABCA3Q99758 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.18■■□□□ 1.3
ABCA3Q99758 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
ABCA3Q99758 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ABCA3Q99758 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.17■■□□□ 1.3
ABCA3Q99758 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.17■■□□□ 1.3
ABCA3Q99758 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms