Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BBS4Q96RK4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 AL031133.1-201ENST00000406807 723 ntBASIC16.74■□□□□ 0.27
BBS4Q96RK4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 LINC01451-201ENST00000623792 534 ntBASIC16.74■□□□□ 0.27
BBS4Q96RK4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BBS4Q96RK4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BBS4Q96RK4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 IGHV3-41-201ENST00000613121 348 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 AC124864.1-201ENST00000623408 392 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 AL590326.2-201ENST00000625139 305 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BBS4Q96RK4 HLA-J-201ENST00000462773 1622 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 LINC00304-203ENST00000565008 1864 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 NFIC-211ENST00000641145 8399 ntBASIC16.73■□□□□ 0.27
BBS4Q96RK4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BBS4Q96RK4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms