Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H4Q96RI1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 AC016396.2-201ENST00000562575 1417 ntBASIC16.62■□□□□ 0.25
NR1H4Q96RI1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 AC006970.2-201ENST00000450065 779 ntBASIC16.62■□□□□ 0.25
NR1H4Q96RI1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 LINC01451-201ENST00000623792 534 ntBASIC16.62■□□□□ 0.25
NR1H4Q96RI1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H4Q96RI1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CROCCP5-201ENST00000436658 830 ntBASIC16.61■□□□□ 0.25
NR1H4Q96RI1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 AC083906.2-201ENST00000511578 360 ntBASIC16.61■□□□□ 0.25
NR1H4Q96RI1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 AL121832.2-201ENST00000610979 668 ntBASIC16.61■□□□□ 0.25
NR1H4Q96RI1 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H4Q96RI1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms