Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AL390754.1-201ENST00000619088 582 ntBASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 AC004408.2-201ENST00000623613 2777 ntBASIC14.91□□□□□ -0.02
CSMD1Q96PZ7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 MIR6805-201ENST00000615055 62 ntBASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 AC107890.1-201ENST00000422478 521 ntBASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 AC069335.1-201ENST00000489972 472 ntBASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD1Q96PZ7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 CU639417.3-201ENST00000624240 1404 ntBASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 AC068587.9-201ENST00000641814 219 ntBASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD1Q96PZ7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 GPR53P-205ENST00000457298 1084 ntBASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 ACA64.2-201ENST00000459014 129 ntBASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 FEM1AP3-201ENST00000403722 1741 ntBASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms