Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 AC116407.2-201ENST00000613639 860 ntBASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 AC004706.3-202ENST00000621574 984 ntBASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC85AQ96PX6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 BX276092.7-203ENST00000637198 1536 ntBASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCDC85AQ96PX6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
CCDC85AQ96PX6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AL591424.1-201ENST00000442569 1213 ntBASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 KRT18P2-201ENST00000447938 1258 ntBASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 STK19B-204ENST00000512515 211 ntBASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 AL589182.2-201ENST00000619332 1049 ntBASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC85AQ96PX6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AC003669.1-201ENST00000334569 611 ntBASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms