Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.47■□□□□ 0.87
CHAMP1Q96JM3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.47■□□□□ 0.87
CHAMP1Q96JM3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHAMP1Q96JM3 AC116353.5-201ENST00000638148 1699 ntBASIC20.47■□□□□ 0.87
CHAMP1Q96JM3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.47■□□□□ 0.87
CHAMP1Q96JM3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 AC046158.3-201ENST00000624947 2558 ntBASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 LINC01451-201ENST00000623792 534 ntBASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHAMP1Q96JM3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 SLC25A1P3-201ENST00000395415 828 ntBASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 AC004263.2-201ENST00000617183 678 ntBASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 AL023973.1-201ENST00000624619 620 ntBASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHAMP1Q96JM3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 AC092865.7-201ENST00000641832 219 ntBASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 AL662844.4-201ENST00000606367 2838 ntBASIC20.44■□□□□ 0.86
CHAMP1Q96JM3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CHAMP1Q96JM3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms