Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 TFAMP1-201ENST00000412727 736 ntBASIC14.9□□□□□ -0.02
SPG11Q96JI7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPG11Q96JI7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.9□□□□□ -0.02
SPG11Q96JI7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 AC005332.7-201ENST00000614046 2005 ntBASIC14.89□□□□□ -0.03
SPG11Q96JI7 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.89□□□□□ -0.03
SPG11Q96JI7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 AC004706.3-202ENST00000621574 984 ntBASIC14.89□□□□□ -0.03
SPG11Q96JI7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 GMCL1P1-201ENST00000463439 1581 ntBASIC14.89□□□□□ -0.03
SPG11Q96JI7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 AC126763.1-201ENST00000552015 2118 ntBASIC14.89□□□□□ -0.03
SPG11Q96JI7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPG11Q96JI7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.89□□□□□ -0.03
SPG11Q96JI7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 RPS15P9-201ENST00000494093 319 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AL390955.2-201ENST00000603032 514 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC100803.2-201ENST00000562459 1963 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 KRT18P32-201ENST00000424695 1287 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AL606495.2-201ENST00000605867 535 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC007064.4-201ENST00000637740 555 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPG11Q96JI7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPG11Q96JI7 CLDN5-201ENST00000403084 2357 ntBASIC14.88□□□□□ -0.03
SPG11Q96JI7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 PMS2P4-201ENST00000412466 1052 ntBASIC14.87□□□□□ -0.03
SPG11Q96JI7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 DUX4L27-201ENST00000554796 1261 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms