Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 AL031284.1-201ENST00000419297 478 ntBASIC14.8□□□□□ -0.04
TIMD4Q96H15 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMD4Q96H15 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMD4Q96H15 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 KRT18P55-202ENST00000578578 1546 ntBASIC14.79□□□□□ -0.04
TIMD4Q96H15 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 AP000867.4-201ENST00000641616 219 ntBASIC14.79□□□□□ -0.04
TIMD4Q96H15 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
TIMD4Q96H15 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMD4Q96H15 AL020996.1-203ENST00000536896 2307 ntBASIC14.78□□□□□ -0.04
TIMD4Q96H15 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms