Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 AC019129.2-201ENST00000609837 1235 ntBASIC17.65■□□□□ 0.42
SIPA1Q96FS4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.65■□□□□ 0.42
SIPA1Q96FS4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIPA1Q96FS4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SIPA1Q96FS4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIPA1Q96FS4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SIPA1Q96FS4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIPA1Q96FS4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AC009949.1-201ENST00000623048 1830 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 ELK2BP-201ENST00000415014 1224 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AC023274.1-201ENST00000418278 595 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AC004832.2-201ENST00000426397 482 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 DDX43P3-201ENST00000441064 443 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 IGHV3-52-201ENST00000519770 353 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AC006504.4-201ENST00000592118 1568 ntBASIC17.64■□□□□ 0.41
SIPA1Q96FS4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIPA1Q96FS4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.63■□□□□ 0.41
SIPA1Q96FS4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 AC112482.1-201ENST00000492080 688 ntBASIC17.63■□□□□ 0.41
SIPA1Q96FS4 STK19B-204ENST00000512515 211 ntBASIC17.63■□□□□ 0.41
SIPA1Q96FS4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIPA1Q96FS4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.62■□□□□ 0.41
SIPA1Q96FS4 CRYGEP-201ENST00000412192 528 ntBASIC17.62■□□□□ 0.41
SIPA1Q96FS4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms