Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 LYSMD4-203ENST00000378904 2122 ntBASIC18.66■□□□□ 0.58
TRIM11Q96F44 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 TSPY22P-201ENST00000427496 604 ntBASIC18.66■□□□□ 0.58
TRIM11Q96F44 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 AC090616.6-201ENST00000582640 721 ntBASIC18.66■□□□□ 0.58
TRIM11Q96F44 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 AL139327.4-201ENST00000612362 153 ntBASIC18.66■□□□□ 0.58
TRIM11Q96F44 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 MYCLP1-201ENST00000372451 1075 ntBASIC18.65■□□□□ 0.58
TRIM11Q96F44 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 AL136038.3-201ENST00000561909 1096 ntBASIC18.65■□□□□ 0.58
TRIM11Q96F44 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM11Q96F44 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM11Q96F44 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM11Q96F44 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM11Q96F44 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM11Q96F44 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM11Q96F44 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
TRIM11Q96F44 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 RN7SL606P-201ENST00000472779 293 ntBASIC18.64■□□□□ 0.57
TRIM11Q96F44 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 AL592071.1-201ENST00000611956 408 ntBASIC18.64■□□□□ 0.57
TRIM11Q96F44 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM11Q96F44 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM11Q96F44 AC010460.3-201ENST00000511359 1579 ntBASIC18.64■□□□□ 0.57
TRIM11Q96F44 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms