Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TM9SF4Q92544 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TM9SF4Q92544 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 AC112777.1-201ENST00000540175 1423 ntBASIC16.68■□□□□ 0.26
TM9SF4Q92544 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.68■□□□□ 0.26
TM9SF4Q92544 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.68■□□□□ 0.26
TM9SF4Q92544 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
TM9SF4Q92544 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF4Q92544 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC099398.1-201ENST00000567919 2776 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC093677.2-201ENST00000600169 1863 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 RPS2P28-201ENST00000314255 741 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 SCARNA2-201ENST00000458748 420 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC073648.2-201ENST00000510116 352 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC009533.2-201ENST00000543664 586 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC008608.2-201ENST00000606089 416 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 AC006538.3-201ENST00000612495 578 ntBASIC16.67■□□□□ 0.26
TM9SF4Q92544 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM9SF4Q92544 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
TM9SF4Q92544 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 RBM17P3-201ENST00000417687 1192 ntBASIC16.66■□□□□ 0.26
TM9SF4Q92544 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 AC009154.2-201ENST00000621177 724 ntBASIC16.66■□□□□ 0.26
TM9SF4Q92544 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 AC106820.2-201ENST00000563775 3264 ntBASIC16.66■□□□□ 0.26
TM9SF4Q92544 AC009053.2-201ENST00000563701 2365 ntBASIC16.66■□□□□ 0.26
TM9SF4Q92544 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM9SF4Q92544 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TM9SF4Q92544 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms