Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AC010507.1-201ENST00000633895 436 ntBASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 BCAR1-209ENST00000546196 1340 ntBASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 AC010460.3-201ENST00000511359 1579 ntBASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SNIP1Q8TAD8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 MRPL20P1-201ENST00000400819 433 ntBASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 AL805961.1-202ENST00000641562 540 ntBASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNIP1Q8TAD8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SNIP1Q8TAD8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 AC005498.2-205ENST00000593218 784 ntBASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms