Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 AC005521.1-201ENST00000393351 872 ntBASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 STARP1-201ENST00000397973 869 ntBASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 KRT18P38-201ENST00000449496 1282 ntBASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 AC012306.2-201ENST00000609350 630 ntBASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 AC073912.3-201ENST00000624414 853 ntBASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 AD000864.1-201ENST00000624076 2295 ntBASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLHC1Q8NHS4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLHC1Q8NHS4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 FAM8A6P-201ENST00000407496 1135 ntBASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 BX664615.1-201ENST00000443558 458 ntBASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 AL359075.1-203ENST00000462729 1002 ntBASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 AC112698.1-201ENST00000510299 916 ntBASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 AC009154.2-201ENST00000621177 724 ntBASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.95■□□□□ 0.3
CLHC1Q8NHS4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 DDX43P3-201ENST00000441064 443 ntBASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AP003733.1-201ENST00000491725 852 ntBASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 ZNF444P1-201ENST00000559497 298 ntBASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.94■□□□□ 0.3
CLHC1Q8NHS4 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms