Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 AC009949.1-201ENST00000623048 1830 ntBASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL22A1Q8NFW1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 SPTLC1P1-201ENST00000447199 261 ntBASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 AC022144.1-201ENST00000602255 1580 ntBASIC23.27■■□□□ 1.32
COL22A1Q8NFW1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.27■■□□□ 1.31
COL22A1Q8NFW1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL22A1Q8NFW1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 GPR53P-205ENST00000457298 1084 ntBASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 IGHV3-72-202ENST00000621503 303 ntBASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.26■■□□□ 1.31
COL22A1Q8NFW1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 UXT-AS1-201ENST00000590504 1525 ntBASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL22A1Q8NFW1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 AC079776.1-201ENST00000401540 1152 ntBASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 HILS1-202ENST00000545329 423 ntBASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
COL22A1Q8NFW1 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms