Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AC006504.4-201ENST00000592118 1568 ntBASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 AC093010.1-201ENST00000473625 1624 ntBASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 ELK2BP-201ENST00000415014 1224 ntBASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 HTR5BP-201ENST00000430851 1154 ntBASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 AC108073.2-201ENST00000464002 357 ntBASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 MIR4751-201ENST00000578027 74 ntBASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNPOQ8N3V7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 BICD1-207ENST00000551848 1962 ntBASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 RPS15P9-201ENST00000494093 319 ntBASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 RFPL4AP1-201ENST00000530883 850 ntBASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 AC092865.6-201ENST00000642101 219 ntBASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 AL049757.1-201ENST00000616842 1596 ntBASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPOQ8N3V7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPOQ8N3V7 CNN2P11-201ENST00000429351 262 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms