Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 AC007967.3-201ENST00000434308 558 ntBASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PHTF2Q8N3S3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AC093909.1-201ENST00000504731 1122 ntBASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AC116407.3-201ENST00000623905 1129 ntBASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AP000867.4-201ENST00000641616 219 ntBASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 AC135776.1-201ENST00000319817 2481 ntBASIC18.24■□□□□ 0.51
PHTF2Q8N3S3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 AL356309.3-201ENST00000624132 1934 ntBASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 AC096633.1-201ENST00000422446 749 ntBASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 AC025062.2-201ENST00000605477 670 ntBASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 LINC00896-202ENST00000609602 2128 ntBASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PHTF2Q8N3S3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 PHGDH-209ENST00000641074 1780 ntBASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 KRT8P47-201ENST00000604727 1398 ntBASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 FAM220CP-201ENST00000395253 831 ntBASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 RPS2P1-201ENST00000434010 821 ntBASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 AC134043.2-201ENST00000624206 2238 ntBASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
PHTF2Q8N3S3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms