Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.3■□□□□ 0.52
SCML4Q8N228 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
SCML4Q8N228 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 LYSMD4-203ENST00000378904 2122 ntBASIC18.29■□□□□ 0.52
SCML4Q8N228 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SCML4Q8N228 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.29■□□□□ 0.52
SCML4Q8N228 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.29■□□□□ 0.52
SCML4Q8N228 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.29■□□□□ 0.52
SCML4Q8N228 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.29■□□□□ 0.52
SCML4Q8N228 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.29■□□□□ 0.52
SCML4Q8N228 AL662844.1-201ENST00000546340 181 ntBASIC18.29■□□□□ 0.52
SCML4Q8N228 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.29■□□□□ 0.52
SCML4Q8N228 MTDHP4-201ENST00000600287 670 ntBASIC18.29■□□□□ 0.52
SCML4Q8N228 AC025062.2-201ENST00000605477 670 ntBASIC18.29■□□□□ 0.52
SCML4Q8N228 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.29■□□□□ 0.52
SCML4Q8N228 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.29■□□□□ 0.52
SCML4Q8N228 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SCML4Q8N228 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCML4Q8N228 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCML4Q8N228 AC046185.3-201ENST00000623228 1824 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.28■□□□□ 0.52
SCML4Q8N228 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.28■□□□□ 0.52
SCML4Q8N228 FDX1P1-201ENST00000449115 551 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 AF186996.4-201ENST00000467186 377 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SCML4Q8N228 RNPS1P1-201ENST00000507437 918 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 AC073648.2-201ENST00000510116 352 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SCML4Q8N228 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.28■□□□□ 0.52
SCML4Q8N228 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.28■□□□□ 0.52
SCML4Q8N228 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.28■□□□□ 0.52
SCML4Q8N228 SLC25A6P4-201ENST00000586535 553 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 AL589182.2-201ENST00000619332 1049 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SCML4Q8N228 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SCML4Q8N228 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.28■□□□□ 0.52
SCML4Q8N228 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
SCML4Q8N228 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 AC007613.1-201ENST00000572811 2597 ntBASIC18.28■□□□□ 0.52
SCML4Q8N228 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.28■□□□□ 0.52
SCML4Q8N228 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCML4Q8N228 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCML4Q8N228 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.27■□□□□ 0.52
SCML4Q8N228 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCML4Q8N228 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.27■□□□□ 0.52
SCML4Q8N228 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCML4Q8N228 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.27■□□□□ 0.52
SCML4Q8N228 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 ACTG1P4-201ENST00000425123 1122 ntBASIC18.27■□□□□ 0.52
SCML4Q8N228 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCML4Q8N228 BX005266.1-201ENST00000473402 457 ntBASIC18.27■□□□□ 0.52
SCML4Q8N228 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
SCML4Q8N228 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.27■□□□□ 0.52
SCML4Q8N228 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.27■□□□□ 0.52
SCML4Q8N228 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCML4Q8N228 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SCML4Q8N228 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCML4Q8N228 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms