Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 CR769767.2-201ENST00000622735 460 ntBASIC15.74■□□□□ 0.11
LRRC28Q86X40 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRC28Q86X40 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRC28Q86X40 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 TSPY5P-201ENST00000426936 936 ntBASIC15.73■□□□□ 0.11
LRRC28Q86X40 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 MCCD1P1-208ENST00000445732 328 ntBASIC15.73■□□□□ 0.11
LRRC28Q86X40 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 YBX1P2-201ENST00000489612 999 ntBASIC15.73■□□□□ 0.11
LRRC28Q86X40 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC28Q86X40 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRRC28Q86X40 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.72■□□□□ 0.11
LRRC28Q86X40 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 AC009947.2-201ENST00000444014 672 ntBASIC15.72■□□□□ 0.11
LRRC28Q86X40 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 LINC01238-205ENST00000567549 1107 ntBASIC15.72■□□□□ 0.11
LRRC28Q86X40 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 AC011558.1-201ENST00000623459 338 ntBASIC15.72■□□□□ 0.11
LRRC28Q86X40 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 AC105020.1-201ENST00000435356 2205 ntBASIC15.72■□□□□ 0.11
LRRC28Q86X40 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC28Q86X40 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC28Q86X40 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms