Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 KRT18P65-201ENST00000439811 1286 ntBASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 FITM1-202ENST00000559294 800 ntBASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRTM1Q86UE6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM1Q86UE6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AC005104.2-201ENST00000427818 678 ntBASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AL390955.1-201ENST00000428694 934 ntBASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AC009947.2-201ENST00000444014 672 ntBASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 UBE2SP1-201ENST00000450587 669 ntBASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AC142381.4-202ENST00000563973 229 ntBASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 AP000525.1-201ENST00000608286 694 ntBASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM1Q86UE6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms