Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE3BQ7Z3V4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 AC005104.2-201ENST00000427818 678 ntBASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.94■■□□□ 1.1
UBE3BQ7Z3V4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 ELK2BP-201ENST00000415014 1224 ntBASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 AC012317.2-201ENST00000623305 2251 ntBASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE3BQ7Z3V4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 AC136632.2-201ENST00000512891 861 ntBASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 AC004706.3-202ENST00000621574 984 ntBASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBE3BQ7Z3V4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 AC006504.4-201ENST00000592118 1568 ntBASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 NCF1C-201ENST00000438382 1427 ntBASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 AC009947.1-201ENST00000444350 727 ntBASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.91■■□□□ 1.1
UBE3BQ7Z3V4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms