Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC034105.1-201ENST00000563488 319 ntBASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 MIR1199-201ENST00000621445 119 ntBASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 AC148477.5-201ENST00000625164 1645 ntBASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.81■□□□□ 0.6
DCLRE1AQ6PJP8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 STK19B-204ENST00000512515 211 ntBASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AC027601.4-201ENST00000611259 610 ntBASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 AC004706.3-202ENST00000621574 984 ntBASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DCLRE1AQ6PJP8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 MYCLP1-201ENST00000372451 1075 ntBASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DCLRE1AQ6PJP8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 AC136632.2-201ENST00000512891 861 ntBASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 FAM197Y3-203ENST00000618346 717 ntBASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 AC005593.1-201ENST00000624894 515 ntBASIC18.78■□□□□ 0.6
DCLRE1AQ6PJP8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms